Schema for Gap - Gap Location

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Schema for Gap - Gap Location

Database: ARS_UCD_addY Primary Table: gap Row Count: 404 Data last updated: 2018-12-27

field	example	SQL type	info
`bin`	653	`smallint(6)`	range
`chrom`	1	`varchar(255)`	values
`chromStart`	8952563	`int(10) unsigned`	range
`chromEnd`	8952663	`int(10) unsigned`	range
`ix`	2	`int(11)`	range
`n`	N	`char(1)`	values
`size`	100	`int(10) unsigned`	range
`type`	contig	`varchar(255)`	values
`bridge`	yes	`varchar(255)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	ix	n	size	type	bridge
653	1	8952563	8952663	2	N	100	contig	yes
779	1	25441719	25441819	4	N	100	contig	yes
1018	1	56773993	56774093	6	N	100	contig	yes
1018	1	56800576	56800601	8	N	25	contig	yes
1244	1	86470614	86470714	10	N	100	contig	yes
1250	1	87254322	87254347	12	N	25	contig	yes
1258	1	88312662	88312687	14	N	25	contig	yes
1260	1	88579655	88579680	16	N	25	contig	yes
1660	1	140935165	140935190	18	N	25	contig	yes
1780	1	156735805	156735830	20	N	25	contig	yes

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.