Schema for Gap - Gap Location

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Schema for Gap - Gap Location

Database: GRCg6a Primary Table: gap Row Count: 952 Data last updated: 2019-09-16

field	example	SQL type	info
`bin`	585	`smallint(6)`	range
`chrom`	1	`varchar(255)`	values
`chromStart`	13096	`int(10) unsigned`	range
`chromEnd`	13196	`int(10) unsigned`	range
`ix`	2	`int(11)`	range
`n`	N	`char(1)`	values
`size`	100	`int(10) unsigned`	range
`type`	contig	`varchar(255)`	values
`bridge`	yes	`varchar(255)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	ix	n	size	type	bridge
585	1	13096	13196	2	N	100	contig	yes
586	1	159754	159854	4	N	100	contig	yes
586	1	178643	178743	6	N	100	contig	yes
587	1	263089	263189	8	N	100	contig	yes
590	1	727463	727563	10	N	100	contig	yes
590	1	757443	757543	12	N	100	contig	yes
591	1	805933	806033	14	N	100	contig	yes
591	1	840350	840450	16	N	100	contig	yes
591	1	863323	863423	18	N	100	contig	yes
591	1	881839	881939	20	N	100	contig	yes

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.