Schema for Gap - Gap Location

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Schema for Gap - Gap Location

Database: GRCg7b Primary Table: gap Row Count: 463 Data last updated: 2021-10-06

field	example	SQL type	info
`bin`	587	`smallint(6)`	range
`chrom`	1	`varchar(255)`	values
`chromStart`	364652	`int(10) unsigned`	range
`chromEnd`	364852	`int(10) unsigned`	range
`ix`	2	`int(11)`	range
`n`	N	`char(1)`	values
`size`	200	`int(10) unsigned`	range
`type`	contig	`varchar(255)`	values
`bridge`	yes	`varchar(255)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	ix	n	size	type	bridge
587	1	364652	364852	2	N	200	contig	yes
591	1	851124	851324	4	N	200	contig	yes
592	1	925765	925865	6	N	100	contig	yes
603	1	2387460	2387660	8	N	200	contig	yes
603	1	2393347	2393547	10	N	200	contig	yes
603	1	2425397	2425597	12	N	200	contig	yes
620	1	4627539	4627739	14	N	200	contig	yes
620	1	4669545	4669745	16	N	200	contig	yes
658	1	9622946	9623046	18	N	100	contig	yes
1157	1	75014745	75014945	20	N	200	contig	yes

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.