Control track and group visibility more selectively below.
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| Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
| Gap |
| Gap Location |
| GC percent |
| GC Percent in 5-Base Windows |
| Short Match |
| Perfect Matches to Short Sequence () |
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| Goat NCBI Genes |
| NCBI Gene Predictions for goat(ARS1) |
| Goat Ensembl Genes |
| Ensembl Gene Predictions for goat(ARS1) |
| Sheep NCBI Genes |
| NCBI Gene Predictions for cross-species sheep (Oar_v4.0) |
| Cattle NCBI Genes |
| NCBI Gene Predictions for cross-species cattle (UMD3.1.1) |
| Cattle Ensembl Genes |
| Ensembl Gene Predictions for cross-species cattle (UMD3.1) |
| hg38 UCSC Genes |
| UCSC Gene Predictions for cross-species human (hg38) |
| miRBase |
| miRNA information provided by miRBase |
| GWAS |
| GWAS data collected from GWAS Atlas |
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| goat rumen H3K27Ac(1) |
| H3K27Ac CHIP-seq of goat rumen tissue |
| human H3K4Me3(192) |
| H3K4Me3 CHIP-seq of human multiple tissues or cells |
| human H3K27Ac(141) |
| H3K27Ac CHIP-seq of human multiple tissues or cells |
| human H3K4Me1(196) |
| H3K4Me1 CHIP-seq of human multiple tissues or cells |
| human H3K27Me3(197) |
| H3K27Me3 CHIP-seq of human multiple tissues or cells |
| human ATAC-seq(107) |
| ATAC-seq of human multiple tissues |
| regulatory regions |
| regulatory regions were from GigaScience paper(DOI:10.1093/gigascience/gix136) |
| expreBar |
| expreBar |
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| Vertebrates_phastCons... |
| Vertebrates_phastCons |
| Vert. Cons (phastCons) |
| Vertebrate Conservation by phastCons, converted from human data on the UCSC Genome Browser website. |
| Vert. El (phastCons) |
| Vertebrate Conserved Elements, converted from human data on the UCSC Genome Browser website. |
| Mammals_phastCons... |
| Mammals_phastCons |
| Mammal Cons (phastCons) |
| Mammalian Conservation by phastCons, converted from human data on the UCSC Genome Browser website. |
| Mammal El (phastCons) |
| Mammalian Conserved Elements, converted from human data on the UCSC Genome Browser website. |
| Ruminantia_phastCons |
| 51 Ruminantia Basewise Conservation by phastCons |
| Pecora_phastCons |
| 48 Pecora Basewise Conservation by phastCons |
| Bovidae_phastCons |
| 37 Bovidae Basewise Conservation by phastCons |
| Vertebrates_phyloP |
| Vertebrate Basewise Conservation by PhyloP, converted from human data on the UCSC Genome Browser website. |
| Mammals_phyloP |
| Mammal Basewise Conservation by PhyloP, converted from human data on the UCSC Genome Browser website. |
| Ruminantia_phyloP |
| 51 Ruminatia Basewise Conservation by PhyloP |
| Pecora phyloP |
| 48 Pecora Basewise Conservation by PhyloP |
| Bovidae_phyloP |
| 37 Bovidae Basewise Conservation by PhyloP |
| 110-way Multiz Align |
| Multiz alignments of 78 ruminants and 32 outgroup species |
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