Schema for expreBar - expreBar |
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Database: Goat Primary Table: expreBar Data last updated: 2021-06-13
Big Bed File: /gbdb/Goat/trans/bigBarChart/Expr/goat/output.bigBed
Item Count: 28,937
Format description: Tissue expreBar
| field | example | description |
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| chrom | 1 | Reference sequence chromosome or scaffold | | chromStart | 105334762 | Start position of feature on chromosome | | chromEnd | 105334833 | End position of feature on chromosome | | name | TRNAW-CCA.111 | Name of transcript | | score | 0 | Score | | strand | . | + or - for strand | | name2 | TRNAW-CCA | Name of gene | | expCount | 99 | Number of tissues | | expScores | 0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0 | Comma separated list of median expression in FPKM for each tissue. | | _dataOffset | 39012881 | Offset of sample data in data matrix file | | _dataLen | 1514 | Length of sample data row in data matrix file |
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Sample Rows
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| chrom | chromStart | chromEnd | name | score | strand | name2 | expCount | expScores | _dataOffset | _dataLen |
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| 1 | 105334762 | 105334833 | TRNAW-CCA.111 | 0 | . | TRNAW-CCA | 99 | 0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0, ... | 39012881 | 1514 |
| 1 | 105425817 | 105440497 | OTOL1 | 111 | . | OTOL1 | 99 | 0.12,0.01,0.02,0.02,0.0,0.0,0.0,0.0,0.0,0.0,0.01,0.06,0.04,0.01,0.0,0.01,0.0,0.00,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.11,0.02,0.00,0.0 ... | 39029757 | 1506 |
| 1 | 105473251 | 105477959 | LOC108636899 | 111 | . | LOC108636899 | 99 | 0.0,0.0,0.0,0.0,0.0,0.0,0.01,0.0,0.0,0.0,0.0,0.08,0.06,0.0,0.36,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.01,0.0,0.07,0.01,0 ... | 39046443 | 1513 |
| 1 | 105586364 | 105617122 | SPTSSB | 666 | . | SPTSSB | 99 | 0.49,1.36,1.04,2.20,8.09,9.13,14.72,16.70,10.18,9.13,11.94,34.14,28.35,39.76,9.69,0.09,0.24,0.15,0.09,0.54,0.79,0.73,0.88,1.08,1 ... | 39063242 | 1538 |
| 1 | 105621363 | 105627177 | LOC102179886 | 222 | . | LOC102179886 | 99 | 0.0,0.0,0.0,0.0,0.0,0.06,0.02,0.0,0.0,0.02,0.03,0.25,0.30,0.14,0.99,0.07,0.00,0.01,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.0,0.04,0.03,0.0 ... | 39080469 | 1513 |
| 1 | 105708656 | 105742967 | NMD3 | 999 | . | NMD3 | 99 | 38.94,40.01,5.91,34.74,4.06,4.87,11.6,8.39,11.62,9.83,11.05,34.85,28.87,13.64,3.5,37.29,45.39,55.61,17.18,12.54,8.31,11.34,13.02 ... | 39099320 | 1752 |
| 1 | 105817244 | 105818057 | LOC108636901 | 111 | . | LOC108636901 | 99 | 0.03,0.04,0.0,0.21,0.03,0.02,0.02,0.03,0.0,0.01,0.02,0.05,0.0,0.0,0.0,0.0,0.0,0.01,0.06,0.0,0.05,0.02,0.01,0.0,0.0,0.02,0.03,0.0 ... | 39116392 | 1513 |
| 1 | 105835724 | 105837446 | LOC102171924 | 222 | . | LOC102171924 | 99 | 0.16,0.19,0.02,0.0,0.0,0.0,0.03,0.03,0.00,0.0,0.02,0.01,0.05,0.0,0.0,0.04,0.06,0.05,0.01,0.0,0.01,0.0,0.0,0.0,0.02,0.06,0.03,0.0 ... | 39133527 | 1513 |
| 1 | 105847448 | 105851563 | LOC108636362 | 111 | . | LOC108636362 | 99 | 0.0,0.00,0.0,0.0,0.0,0.0,0.01,0.0,0.0,0.01,0.0,0.12,0.12,0.0,0.0,0.02,0.00,0.0,0.00,0.0,0.0,0.0,0.0,0.0,0.0,0.01,0.03,0.06,0.01, ... | 39150347 | 1513 |
| 1 | 105889211 | 105922236 | B3GALNT1 | 555 | . | B3GALNT1 | 99 | 8.34,5.94,2.06,7.0,1.27,0.56,0.94,0.94,0.80,0.68,0.99,0.94,0.82,0.01,0.0,24.91,34.89,33.73,9.65,1.56,1.85,2.32,3.55,4.29,4.1,11. ... | 39167364 | 1536 |
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